Vulnerability · Published Mar 2, 2026 · Assigned by VulDB
CVE-2026-3408Open Babel CDXML File atom.cpp GetExplicitValence null pointer dereference
Medium 4.3
In plain English
A medium-severity null pointer dereference in Open Babel. Proof-of-concept exploit code is public. The chance it is exploited in the next 30 days is estimated at 0.6% (higher than 47% of all known vulnerabilities). Fixed versions are available - upgrade the affected package.
Official description
A vulnerability was identified in Open Babel up to 3.1.1. This impacts the function OBAtom::GetExplicitValence of the file isrc/atom.cpp of the component CDXML File Handler. Such manipulation leads to null pointer dereference. The attack can be launched remotely. The exploit is publicly available and might be used. The name of the patch is e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a. It is best practice to apply a patch to resolve this issue.
Affected packages & fixed versions
| Ecosystem | Package | Fixed in | Advisory |
|---|---|---|---|
| Debian:12 | openbabel | no fix listed | DEBIAN-CVE-2026-3408 |
| Debian:13 | openbabel | no fix listed | DEBIAN-CVE-2026-3408 |
| Debian:14 | openbabel | 3.2.0+dfsg-1 | DEBIAN-CVE-2026-3408 |
| PyPI | openbabel | 3.2.0 | GHSA-rxpr-wq63-jr7p |
| PyPI | openbabel | 3.2.0 | PYSEC-2026-2791 |
| Ubuntu:22.04:LTS | openbabel | no fix listed | UBUNTU-CVE-2026-3408 |
| Ubuntu:24.04:LTS | openbabel | no fix listed | UBUNTU-CVE-2026-3408 |
| Ubuntu:25.10 | openbabel | no fix listed | UBUNTU-CVE-2026-3408 |
| Ubuntu:26.04:LTS | openbabel | no fix listed | UBUNTU-CVE-2026-3408 |
| Ubuntu:26.10 | openbabel | no fix listed | UBUNTU-CVE-2026-3408 |
Affected products (as reported)
| Vendor | Product | Versions |
|---|---|---|
| n/a | Open Babel | 3.1.03.1.1 |
Weakness: CWE-476, CWE-404 · Vector: CVSS:3.1/AV:N/AC:L/PR:N/UI:R/S:U/C:N/I:N/A:L/E:P/RL:O/RC:C
References
- VDB-348303 | Open Babel CDXML File atom.cpp GetExplicitValence null pointer dereference vdb-entry, technical-description
- VDB-348303 | CTI Indicators (IOB, IOC, IOA) signature, permissions-required
- Submit #763756 | openbabel Open Babel 3.1.1 and master-branch NULL Pointer Dereference third-party-advisory
- https://github.com/openbabel/openbabel/issues/2848 issue-tracking
- https://github.com/openbabel/openbabel/pull/2862 issue-tracking, patch
- https://github.com/oneafter/0128/blob/main/ob3/repro.cdxml exploit
- https://github.com/VedantMadane/openbabel/commit/e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a patch